淋巴囊肿病毒中国分离株基因组序列和结构分析Analysis on Genome Sequence and Structure of Lymphocystis Disease Virus-Chinese Isolate
闫秀英,吴灶和,简纪常,鲁义善,孙修勤
摘要(Abstract):
LCDV-cn是分离自中国养殖牙鲆的淋巴囊肿病病原,给中国牙鲆养殖业带来了严重危害。通过PCR、克隆和测序,获得了LCDV-cn部分基因的序列,证明LCDV-cn与LCDV-C的基因组序列是一致的。比较基因组学分析发现,LCDV-cn基因组中有137个ORF是其独有的、与LCDV-1及其它虹彩病毒无同源区域。对LCDV-cn基因组进行生物信息学分析发现,在LCDV-cn独有的ORF中,有的编码与宿主同源的蛋白,有的编码与DNA复制相关的蛋白,某些ORF编码的蛋白含有跨膜区等。LCDV-cn的独有基因或许对其毒力和宿主范围有关。
关键词(KeyWords): 淋巴囊肿病毒中国分离株LCDV-cn;比较基因组学;生物信息学
基金项目(Foundation): 国家高技术研究发展计划项目(2006AA100309)资助
作者(Author): 闫秀英,吴灶和,简纪常,鲁义善,孙修勤
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