基于人工神经网络的凡纳滨对虾分子标记育种值预测Prediction of Breeding Value of Molecular Markers in Litopenaeus vannamei Using Artificial Neural Network
杨琼,刘青云,李强勇,彭敏,杨春玲,童艳梅,曾地刚,陈秀荔,陈晓汉,赵永贞
摘要(Abstract):
【目的】探讨逆传播人工神经网络(BPANN)算法用于预测分子标记育种值的可行性。【方法】采用高通量测序技术对284尾F1代凡纳滨对虾及其父母本进行特定长度扩增片段测序(SLAF-seq),随机取200尾对虾样品的数量性状基因座(QTL)基因型和体质量数据,构建BPANN预测模型,利用该模型分别对其余84尾凡纳滨对虾进行体质量性状预测。【结果】构建了1个高密度的单核苷酸多态性(SNP)遗传连锁图谱,鉴定出6个与体质量相关的QTL,对此QTL的BPANN育种值预测结果显示,育种值的平均误差为0.032 0±0.006 4,低于贝叶斯线性回归模型预测的平均误差值(0.0462±0.0056)。【结论】BPANN用于预测凡纳滨对虾分子标记育种值效果良好。
关键词(KeyWords): 人工神经网络;凡纳滨对虾;分子标记;育种值
基金项目(Foundation): 广西创新驱动发展专项资金项目(桂科AA17204080);; 国家现代农业产业技术体系广西创新团队建设任务书(nycytxgxcxtd-14-01);; 国家虾产业技术体系建设任务书(CARS-48)
作者(Author): 杨琼,刘青云,李强勇,彭敏,杨春玲,童艳梅,曾地刚,陈秀荔,陈晓汉,赵永贞
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