罗非鱼罗湖病毒RT-PCR检测方法的建立及初步应用Development and Application of a RT-PCR Assay of Tilapia Lake Virus
雷燕,肖洋,赵振峰,唐绍林,黎建斌,陈福艳
摘要(Abstract):
【目的】建立快速检测罗非鱼罗湖病毒(Tilapia Lake Virus,Ti LV)的RT-PCR方法。【方法】参照GenBank中罗非鱼罗湖病毒全基因序列,依据其假定蛋白基因片段3设计合成1对特异性扩增引物,提取罗湖病毒RNA,逆转录成cDNA,进行PCR扩增,通过优化扩增条件和扩增体系,建立快速检测罗非鱼罗湖病毒的RT-PCR方法。用该方法对自然感染罗湖病毒发病的罗非鱼样品进行RT-PCR扩增。【结果】RT-PCR扩增得到与试验设计相符的499 bp的特异性目的条带,而对健康罗非鱼、野生罗非鱼及其他病毒对照组的扩增结果均为阴性。测序比对结果表明,该方法检测结果准确,最低可检测出约10fg/mL的质粒DNA,具有较好的特异性和较高的敏感性。用该方法对332份临床样品进行RT-PCR检测,其中36份样品扩增出特异性的目的条带,经测序比对,检测结果正确。【结论】建立的检测方法可用于TiLV的检测。
关键词(KeyWords): 罗非鱼;罗湖病毒;快速检测;RT-PCR
基金项目(Foundation): 广西科技重大专项(桂科AA17204081-5);; 国家现代农业产业技术体系广西创新团队建设专项资金(nycytxgxcxtd-08-02)
作者(Author): 雷燕,肖洋,赵振峰,唐绍林,黎建斌,陈福艳
参考文献(References):
- [1]FERGUSON H W,KABUUSU R,BELTRAN S,et al.Syncytial hepatitis of farmed tilapia,Oreochromis niloticus(L.):a case report[J].J Fish Dis,2014,37:583-589.
- [2]EYNGOR M,ZAMOSTIANO R,KEMBOU TSOFACKJ E,et al.Identification of a novel RNA virus lethal to tilapia[J].J Clin Microbiol,2014,52:4137-4146.
- [3]BACHARACH E,MISHRA N,BRIESE T,et al.Characterization of a novel rthomyxo-like virus causing mass die-offs of tilapia[J].MBio,2016,7:e00431-00416.
- [4]DEL-POZO J,MISHRA N,KABUUSU R,et al.Syncytial hepatitis of tilapia(Oreochromis niloticus L.)is associated with Orthomyxovirus-like virions in hepatocytes[J].Vet Pathol,2017,54:164-170.
- [5]FATHI M,DICKSON C,DICKSON M,et al.Identification of tilapia lake virus in Egypt in Nile tilapia affected by“summer mortality”syndrome[J].Aquaculture,2017,473:430-432.
- [6]DONG H T,SIRIROOB S,MEEMETTA W,et al.Awarning and an improved PCR detection method for tilapia lake virus(TiLV)disease in Thai tilapia farms.https://www.researchgate.net/publication/316283907.
- [7]雷燕,赵振峰,李海涛.池塘养殖发病罗非鱼检出罗湖病毒.http://bbs.liyang-tech.com/forum.php?mod=view thread&tid=14932&highlight=%C2%DE%BA%FE%B2%A1%B6%BE&_dsign=01c74355.
- [8]DONG H T,SIRIROOB S,MEEMETTA W,et al.Emergence of tilapia lake virus in Thailand and an alternative semi-nested RT-PCR for detection[J].Aquaculture,2017,476:111-118.
- [9]王玮,丁建乐,房金岑.罗非鱼产业标准化现状及分析[J].上海海洋大学学报,2012,21(6):976-981.
- [10]杨弘.中国罗非鱼产业发展趋势与建议[J].海洋与渔业,2010(5):33-34.
- [11]卢迈新.罗非鱼链球菌病研究进展[J].南方水产,2010,6(1):75-79.
- [12]王民权,葛朋彪.罗非鱼主要病害控制技术[J].中国水产,2006(7):57.
- [13]郭玉娟,张德锋,樊海平,等.中国南方地区罗非鱼无乳链球菌的分子流行病学研究[J].水产学报,2012,36(3):399-405.
- [14]杨宁,黄海,张希,等.尼罗罗非鱼嗜水气单胞菌病的病原分离鉴定和药敏试验[J].水产科学,2014,33(5):306-310.
- [15]陈善真,潘忠超,段元慧,等.一株尼罗罗非鱼致病性嗜水气单胞菌的分离鉴定及药敏试验[J].广东农业科学,2014(7):158-161.
- [16]李聪,蔡岩,周永灿,等.海南罗非鱼致病性维氏气单胞菌分离鉴定及药敏特性研究[J].水产科学,2015,34(10):640-646.
- [17]韦阳道,杨军,文衍红,等.罗非鱼竖鳞病病原维氏气单胞菌的分离鉴定与致病性研究[J].中国畜牧兽医,2016,43(11):3047-3052.
- [18]ERAN B,NISCHAY M,THOMAS B,et al.Characterization of a novel orthomyxo-like virus causing mass die-offs of Tilapia[J].American Society for Microbiology,2016,7(2):1-7.
- [19]KEMBOU TSOFACK J E,ZAMOSTIANO R,WATTEDS,et al.Detection of Tilapia lake virus in clinical samples by culturing and nested reverse transcription-PCR[J].Journal of Clinical Microbiology,2017,55(3):759.